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Cloud-based genomics pipelines for ophthalmology: Reviewed from research to clinical practice

Wong, DCS; Olivera, M; Yu, J; Szabo, A; Moghul, I; Balaskas, KS; Luben, R; ... Keane, PA; + view all (2021) Cloud-based genomics pipelines for ophthalmology: Reviewed from research to clinical practice. Journal for Modeling in Ophthalmology , 3 (1) pp. 101-140. 10.35119/maio.v3i1.115. Green open access

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Abstract

Aim: To familiarize clinicians with clinical genomics, and to describe the potential of cloud computing for enabling the future routine use of genomics in eye hospital settings. Design: Review article exploring the potential for cloud-based genomic pipelines in eye hospitals. Methods: Narrative review of the literature relevant to clinical genomics and cloud computing, using PubMed and Google Scholar. A broad overview of these fields is provided, followed by key examples of their integration. Results: Cloud computing could benefit clinical genomics due to scalability of resources, potentially lower costs, and ease of data sharing between multiple institutions. Challenges include complex pricing of services, costs from mistakes or experimentation, data security, and privacy concerns. Conclusions and future perspectives: Clinical genomics is likely to become more routinely used in clinical practice. Currently this is delivered in highly specialist centers. In the future, cloud computing could enable delivery of clinical genomics services in non-specialist hospital settings, in a fast, cost-effective way, whilst enhancing collaboration between clinical and research teams.

Type: Article
Title: Cloud-based genomics pipelines for ophthalmology: Reviewed from research to clinical practice
Open access status: An open access version is available from UCL Discovery
DOI: 10.35119/maio.v3i1.115
Publisher version: https://doi.org/10.35119/maio.v3i1.115
Language: English
Additional information: Copyright (c) 2021 David C.S. Wong, Maximiliano Olivera, Jing Yu, Anita Szabo, Ismail Moghul, Konstantinos Balaskas, Robert Luben, Anthony P. Khawaja, Nikolas Pontikos, Pearse A. Keane. This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
UCL classification: UCL
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Brain Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Brain Sciences > Institute of Ophthalmology
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Cancer Institute
UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Medical Sciences > Cancer Institute > Research Department of Cancer Bio
URI: https://discovery-pp.ucl.ac.uk/id/eprint/10134769
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