Yachdav, G;
Wilzbach, S;
Rauscher, B;
Sheridan, R;
Sillitoe, I;
Procter, J;
Lewis, SE;
... Goldberg, T; + view all
(2016)
MSAViewer: interactive JavaScript visualization of multiple sequence alignments.
Bioinformatics
, 32
(22)
pp. 3501-3503.
10.1093/bioinformatics/btw474.
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Abstract
SUMMARY: The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is ‘web ready’: written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components. AVAILABILITY AND IMPLEMENTATION: The MSAViewer is released as open source software under the Boost Software License 1.0. Documentation, source code and the viewer are available at http://msa.biojs.net/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
| Type: | Article |
|---|---|
| Title: | MSAViewer: interactive JavaScript visualization of multiple sequence alignments |
| Open access status: | An open access version is available from UCL Discovery |
| DOI: | 10.1093/bioinformatics/btw474 |
| Publisher version: | https://doi.org/10.1093/bioinformatics/btw474 |
| Language: | English |
| Additional information: | Copyright © The Author 2016. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
| Keywords: | Science & Technology, Life Sciences & Biomedicine, Technology, Physical Sciences, Biochemical Research Methods, Biotechnology & Applied Microbiology, Computer Science, Interdisciplinary Applications, Mathematical & Computational Biology, Statistics & Probability, Biochemistry & Molecular Biology, Computer Science, Mathematics, Prediction |
| UCL classification: | UCL UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences UCL > Provost and Vice Provost Offices > School of Life and Medical Sciences > Faculty of Life Sciences > Div of Biosciences > Structural and Molecular Biology |
| URI: | https://discovery-pp.ucl.ac.uk/id/eprint/1506382 |
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