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Averaged electron collision cross sections for thermal mixtures of alpha-alanine conformers in the gas phase

Fujimoto, MM; Lima, EVRD; Tennyson, J; (2016) Averaged electron collision cross sections for thermal mixtures of alpha-alanine conformers in the gas phase. Journal of Physics B: Atomic, Molecular and Optical Physics , 49 (21) , Article 215201. 10.1088/0953-4075/49/21/215201. Green open access

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Abstract

A theoretical study of elastic electron collisions with 9 conformers of the gas-phase amino acid $\alpha$-alanine (CH$_3$CH(NH$_2$)COOH) is performed. The eigenphase sums, resonance features, differential and integral cross sections are computed for each individual conformer. Resonance positions for the low-energy $\pi^*$ shape resonance are found to vary from 2.6 eV to 3.1 eV and the resonance widths from 0.3 eV to 0.5 eV. Averaged cross sections for thermal mixtures of the 9 conformers are presented. Both theoretical and experimental population ratios are considered. Thermally-averaged cross sections obtained using the best theoretical estimates give reasonable agreement with the observed thermal cross sections. Excited conformers IIA and IIB make a large contribution to this average due to their large permanent dipole moments.

Type: Article
Title: Averaged electron collision cross sections for thermal mixtures of alpha-alanine conformers in the gas phase
Open access status: An open access version is available from UCL Discovery
DOI: 10.1088/0953-4075/49/21/215201
Publisher version: http://doi.org/10.1088/0953-4075/49/21/215201
Language: English
Additional information: © 2016 IOP Publishing Ltd. This is an author-created, un-copyedited version of an article accepted for publication/published in Journal of Physics B: Atomic, Molecular and Optical Physics. IOP Publishing Ltd is not responsible for any errors or omissions in this version of the manuscript or any version derived from it. The Version of Record is available online at http://doi.org/10.1088/0953-4075/49/21/215201
Keywords: Electron collisions, R-matrix, conformers
UCL classification: UCL
UCL > Provost and Vice Provost Offices > UCL BEAMS
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences
UCL > Provost and Vice Provost Offices > UCL BEAMS > Faculty of Maths and Physical Sciences > Dept of Physics and Astronomy
URI: https://discovery-pp.ucl.ac.uk/id/eprint/1518386
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